Insertion junction: CLIP2.005099_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005099
Chromosome:chromosome 12
Location:9203387
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g543050 (1 of 1) PF04241 - Protein of unknown function (DUF423) (DUF423) intron
Cre12.g543100 (1 of 1) K03256 - tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit (TRM6, GCD10) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACGCTGTGCCAGGCAGCTCTGTAACGCAACCCATGGCCCGACGCTC
Internal bar code:CTGGTTTATAATGTGAAGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5704
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:122
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:122

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCATGATACCGGTAC
Suggested primer 2:GCTAGAAGCGTCGACCCTAC