Insertion junction: CLIP2.005104_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005104
Chromosome:chromosome 16
Location:1788427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655150 (1 of 2) PTHR14136:SF11 - THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCAAATGTCGGAACCCTTTGCTTGCGGCCGCGACCCAGACGACATAGC
Internal bar code:AAGTATCCTCTTGACCATCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1214
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACCACTCACAATAGCCT
Suggested primer 2:GCTCAAACAGGGTGCACAAG