Insertion junction: CLIP2.005113_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005113
Chromosome:chromosome 1
Location:315554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g001750 TIG1 chloroplast trigger factor; (1 of 1) PTHR30560 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGGGCGATGCTGCATGGTGCATGGCGCGGCAGCGTGGCGTGGGGTG
Internal bar code:TAAATCGAAGCTTCGTAACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2074
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGGGGCCGAGTATAAGT
Suggested primer 2:TTTACGCGACGCCTCTATCC