Insertion junction: CLIP2.005115_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005115
Chromosome:chromosome 16
Location:5895441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g679200 PEX1 Peroxisome biogenesis protein; (1 of 1) K13338 - peroxin-1 (PEX1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTTATTGGCTAGGCGTGCGGGCTGCAGCAGCCTTGGCAGAAATGAGCG
Internal bar code:TACGCTATGTTATTGCACAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGATGCTGATGCTGC
Suggested primer 2:TTGAGTACGTGTGGCTGTCC