Insertion junction: CLIP2.005119_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005119
Chromosome:chromosome 6
Location:295605
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g250850 MSH1 DNA mismatch repair protein, MutS homolog; (1 of 1) PTHR11361:SF82 - DNA MISMATCH REPAIR PROTEIN MSH1, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCAGCACCTACGTGCCCCTCTCCTCTCCCCCCCGCTCCGGTGTGCTCCC
Internal bar code:CTGCACGTCGGTTTACGGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:279
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCGTTGCACTGCATGATC
Suggested primer 2:TGCGTTGTCTACTTCCCACC