Insertion junction: CLIP2.005120_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005120
Chromosome:chromosome 16
Location:5710651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680800 CGL155 (1 of 25) IPR000210//IPR011333 - BTB/POZ domain // POZ domain; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACGAGCTCCACCACCCGCGGCAGCACCGGTGCCGGCGGCGGCACAAG
Internal bar code:CTGCTCCCGGATGTGGCTTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1816
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTACATCGGCCCTACTGCTG
Suggested primer 2:TCTCAGGTGAGCACGGTTTC