Insertion junction: CLIP2.005121_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005121
Chromosome:chromosome 7
Location:2659869
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g330650 (1 of 10) PF02536 - mTERF (mTERF) 3'UTR
Cre07.g330700 FAP91,Cam-IP2 Flagellar Associated Protein 91; (1 of 1) PF14738 - Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1 (PaaSYMP) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATAAGCAACGAATCGTGCACGGCCGCACGTCACAAAACAGGACCCCA
Internal bar code:AAAGGATCCGGTCACTGGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1054
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATTGGCGATGGAGGCAT
Suggested primer 2:CGTATGTCTGGGTGATCCGG