Insertion junction: CLIP2.005127_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005127
Chromosome:chromosome 7
Location:3818305
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338602 POLH1 (1 of 1) PTHR11076//PTHR11076:SF11 - DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER // DNA POLYMERASE ETA; DNA polymerase eta subunit intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTAGGGCGCTCCTGGCGGGGTGCCTCCTACCACGCCCCCTGGCAGTAG
Internal bar code:TTTCCCTATCTAAAACTGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GTATTGACACGCCCCAGACA
Suggested primer 2:TATAGCAGCACGCCCATGAG