Insertion junction: CLIP2.005129_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005129
Chromosome:chromosome 15
Location:300267
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635100 (1 of 2) IPR000104//IPR010402 - Antifreeze protein, type I // CCT domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTCCCGCACTCCCCTGCCCTCCGCTCCCTCGCGCCGCCTCTCACAGCT
Internal bar code:TACATTAACGCAAGAGGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACACGCTCACTCACTCACT
Suggested primer 2:GCAAAAGCAACCTGAAGGGG