Insertion junction: CLIP2.005129_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005129
Chromosome:chromosome 15
Location:300270
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635100 (1 of 2) IPR000104//IPR010402 - Antifreeze protein, type I // CCT domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGCGAGAGAGAGAGAGAGCGAGGTGCACGAAAAGCGAGTGAGGGAGGC
Internal bar code:TACATTAACGCAAGAGGTTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2329
LEAP-Seq percent confirming:81.6901
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAAGCAACCTGAAGGGG
Suggested primer 2:CACACGCTCACTCACTCACT