Insertion junction: CLIP2.005135_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005135
Chromosome:chromosome 1
Location:3298202
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021200 CGL47 conserved protein with F-box domain; (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGACAAGGACAATCACTTCCCTGTTGAGCACCGACTATTCCTGCCCT
Internal bar code:AACCAAGGATCGTTGTAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:54
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TACATGCAGGCGTACGTGTT
Suggested primer 2:GGGGGCTATGTACATCCGTG