Insertion junction: CLIP2.005135_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005135
Chromosome:chromosome 1
Location:3298204
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021200 CGL47 conserved protein with F-box domain; (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTAAACCGCTGATGCTGTTAGGCACTGGTGGAGAGCTTCGTCGCAAAC
Internal bar code:AACCAAGGATCGTTGTAATTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3079
LEAP-Seq percent confirming:56.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGCTATGTACATCCGTG
Suggested primer 2:TACATGCAGGCGTACGTGTT