Insertion junction: CLIP2.005142_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005142
Chromosome:chromosome 12
Location:2111542
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510034 (1 of 8) PF13432 - Tetratricopeptide repeat (TPR_16) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGCCGAGGCGCGGGCACTGCTACTTCAGGCGGTGCGACTGATGCCCGG
Internal bar code:TTCGGGGTTCGTCCTAGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1756
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACAACAACTGCCAGCCG
Suggested primer 2:GTGCTTAATGCTGTCGCGAG