Insertion junction: CLIP2.005146_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005146
Chromosome:chromosome 5
Location:3576484
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCCAACAAAGCCGGTGTCGGTTTATGTGTTCGGGTGCGCTCGGCCAA
Internal bar code:TGAGCGAAGTGCTGGGTTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1132
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGTGAGGTGATGGCTG
Suggested primer 2:TCGGTCAAAGTCTGCAACGA