Insertion junction: CLIP2.005146_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005146
Chromosome:chromosome 5
Location:3576485
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234050 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGACCACCCGCCCCTGACCCGCCCCGATTGATACGACGTGTTTGTGGCT
Internal bar code:TGAGCGAAGTGCTGGGTTGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:932
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGTCAAAGTCTGCAACGA
Suggested primer 2:ATGGTGTGAGGTGATGGCTG