Insertion junction: CLIP2.005150_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005150
Chromosome:chromosome 2
Location:1725061
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g086100 CGL40 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAACGGTTGCCTTACTGCCATGCCTGCCACCCTTCTCCGCGCGCCTGC
Internal bar code:CAATTTGTTTAGGTTTGGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1875
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAGGGTACGCGAATCGA
Suggested primer 2:CAGTCCCACAACGCTGTTTG