Insertion junction: CLIP2.005153_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005153
Chromosome:chromosome 10
Location:6425987
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464650 CGL36 (1 of 1) PF12646 - Domain of unknown function (DUF3783) (DUF3783); Conserved in the Green Lineage 3'UTR
Cre10.g464700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATAGGGAGTGCGGAAGTCGGGCAGGCTCATGCGGGCGCCTCGCTAGC
Internal bar code:GGTACAAAAAATATACTTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2865
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTTAGCAGGTTGGCATTC
Suggested primer 2:ATGAGGGATTGGGGCAGTTG