Insertion junction: CLIP2.005153_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005153
Chromosome:chromosome 10
Location:6425989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464650 CGL36 (1 of 1) PF12646 - Domain of unknown function (DUF3783) (DUF3783); Conserved in the Green Lineage 3'UTR
Cre10.g464700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATTGCACGGTACGCAGAGGTACCGCATGAGCATTGTAGCAGCACCAG
Internal bar code:GGTACAAAAAATATACTTGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1910
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGGGATTGGGGCAGTTG
Suggested primer 2:GCCTTAGCAGGTTGGCATTC