Insertion junction: CLIP2.005159_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005159
Chromosome:chromosome 17
Location:3041658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720000 CCT9 (1 of 1) IPR002423//IPR027409 - Chaperonin Cpn60/TCP-1 family // GroEL-like apical domain; T-complex protein 1, eta subunit CDS
Cre17.g720050 FTSH2,FHL2 (1 of 1) PTHR23076:SF72 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 2, CHLOROPLASTIC-RELATED; membrane AAA-metalloprotease, chloroplast CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTCCACACGGTGAGCGCCATTCGAGGGGCCGTTTCGGCAGTAACTT
Internal bar code:TGTCGAGGCTACACGGGAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3803
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGGCGTGCCAAAAAGATT
Suggested primer 2:TGTAAGCGTTGTTTGCTGGC