Insertion junction: CLIP2.005162_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005162
Chromosome:chromosome 15
Location:1629700
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre19.g750597 CDPK2 Calcium/calmodulin-dependent protein kinase; (1 of 2) PF00069//PF13499 - Protein kinase domain (Pkinase) // EF-hand domain pair (EF-hand_7) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTGTGTGTTTTGGACCACGTTCATGGTGTGGCAGTGGTGCACCACCGA
Internal bar code:AGGGGGTCATTCTGCTTCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:434
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGAGGAGGAGGGGATA
Suggested primer 2:CCTTTGCTTTGGGCTGTCAC