Insertion junction: CLIP2.005163_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005163
Chromosome:chromosome 1
Location:2511598
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014800 MSH7,CPL21 putative MutS type 2 DNA repair protein; (1 of 1) K07456 - DNA mismatch repair protein MutS2 (mutS2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACCTGCTTGATACGGCGGATGTGGCCACTAAAGGTGGACAGGTTCT
Internal bar code:CGGGGTAGCGTCTCTCCCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3841
LEAP-Seq percent confirming:89.7436
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGACGACCTTGCTGATT
Suggested primer 2:GCACCCTAGAGGCAATTGGT