Insertion junction: CLIP2.005169_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005169
Chromosome:chromosome 16
Location:1454976
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g652550 PRPL24 (1 of 1) PTHR12903:SF1 - 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC; Chloroplast ribosomal protein L24 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAGAAAGTGTTCTGGGCCTCTAGACCCCTCCTAAGAATACAGTGACAAA
Internal bar code:TGCTTTGATATTGTGGGTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1540
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AAACTAGAGCAAGTGGGGCC
Suggested primer 2:TTTGCCCAGTCTCGTTCTCC