Insertion junction: CLIP2.005172_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005172
Chromosome:chromosome 7
Location:3766037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338350 CPLD50 Conserved in the Plant Lineage and Diatoms; (1 of 1) PTHR10072//PTHR10072:SF43 - IRON-SULFUR CLUSTER ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGGTGGCACGCCTGGGTGCAAGGTGCGACAGCTGCTACCGGTATTC
Internal bar code:CGTAAATGTGAGAAATTGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:424
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TACGACAGCAGCGGTATGAC
Suggested primer 2:CGAGGAGGAAGGAGGAGGAA