Insertion junction: CLIP2.005178_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005178
Chromosome:chromosome 10
Location:3900184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446500 CPO1,CPL24 (1 of 1) PTHR14241//PTHR14241:SF10 - INTERFERON-INDUCED PROTEIN 44 // VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN DDB_G0292188; Conserved in the Plant Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAATCGTGAGCGGCTGAGCGTGATCCTCGGCACCGTATGATGCCCCTAG
Internal bar code:GGGATGGGGTACTATGCGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3332
LEAP-Seq percent confirming:93.1818
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGATGTCATGGGGTTGA
Suggested primer 2:CTGGTGCTCCCTTTTCCGAT