Insertion junction: CLIP2.005179_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005179
Chromosome:chromosome 13
Location:1997686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576650 HIS4 Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; (1 of 1) 3.6.1.31 - Phosphoribosyl-ATP diphosphatase / Phosphoribosyladenosine triphosphate pyrophosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTAGGGTTTTAGAACAGCAGAACAGAAACCGTGAAAGCGTGAAAGCGTG
Internal bar code:GCGACTTCCGCCTCTCCAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:529
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGATACCGCCACATCCGC
Suggested primer 2:ATTCTTATACCAGCGGCGGG