Insertion junction: CLIP2.005182_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005182
Chromosome:chromosome 9
Location:6680019
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g416750 CCT2 T-complex protein 1, beta subunit; (1 of 1) K09494 - T-complex protein 1 subunit beta (CCT2) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTTTGCCTCACGGCGGCATGGGATTGGGCCGCGCCAGATGGACGTAGG
Internal bar code:ACAGGTTTAGCTCGCGTAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:525
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TATACAACGGACGCGGATGG
Suggested primer 2:TAAAAAGAGCTGGGGAGCCG