Insertion junction: CLIP2.005187_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005187
Chromosome:chromosome 1
Location:6287995
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044650 (1 of 1) PF00168//PF17047 - C2 domain (C2) // Synaptotagmin-like mitochondrial-lipid-binding domain (SMP_LBD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCTTTGCCGACCCCCGGAAACGACTGCCCCCGTAGGACATCACGGCC
Internal bar code:GACTGCCCATTGAAAGCGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3399
LEAP-Seq percent confirming:97.8571
LEAP-Seq n confirming:137
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:140

Suggested primers for confirmation by PCR

Suggested primer 1:AACCGCAGTTGCATGTTGAC
Suggested primer 2:ACGGTTGTCGAGTAAACGCT