Insertion junction: CLIP2.005189_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005189
Chromosome:chromosome 7
Location:3721815
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338000 MCM2 (1 of 1) K02540 - DNA replication licensing factor MCM2 (MCM2); Minichromosome maintenance protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACAAACTGGCCCCAACCAATTAAGTGAATCAACTGGCAGCAAAGTAC
Internal bar code:GAGGGGTCCGCGGCTCCTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1372
LEAP-Seq percent confirming:55.2632
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGATAAGCAGCAGGCCT
Suggested primer 2:CGAGGTGCTTGTGGTGTTTG