Insertion junction: CLIP2.005189_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005189
Chromosome:chromosome 7
Location:3721878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g338000 MCM2 (1 of 1) K02540 - DNA replication licensing factor MCM2 (MCM2); Minichromosome maintenance protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGGTTCTCTACTTGCACCGTGTAAGGCGCAAGTAAGCATGGAGCAAG
Internal bar code:GAGGGGTCCGCGGCTCCTTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1481
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGGTGCTTGTGGTGTTTG
Suggested primer 2:GGATGATAAGCAGCAGGCCT