Insertion junction: CLIP2.005190_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005190
Chromosome:chromosome 3
Location:7640460
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204350 CLPR4 (1 of 3) PTHR10381//PTHR10381:SF24 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // SUBFAMILY NOT NAMED; inactive subunit of chloroplast ClpP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCACACACGCGCGCACTCACTGGTGGGCAGCGGCTGCTCCTCGTCGTC
Internal bar code:CTCCTAGTACTCTCCGTAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:770
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCGAAACAACGGTATGGA
Suggested primer 2:AAGGGTGATGATGCGGTGAG