Insertion junction: CLIP2.005196_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005196
Chromosome:chromosome 3
Location:1703762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g153200 5'UTR
Cre03.g800299 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGGTCATTCAGGTGGGTCGTCACTGGCTGCTGTTCGCTTCTTCTCAC
Internal bar code:GCTTGAATAGTAAGATATTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2995
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAGACGACCGGACAATTC
Suggested primer 2:TGCACCACAAGACACTTGGT