Insertion junction: CLIP2.005198_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005198
Chromosome:chromosome 7
Location:3304137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334600 CGL20 (1 of 1) PTHR35713//PTHR35713:SF1 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MOB24; Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAATGCTGGGCCGGCCACACGCTATTGCAAAATGCTCTTACGCCATGGC
Internal bar code:GGTCATACTGCGCTACTACAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:6099
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:86
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:86

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCCACCACTCGAAGACA
Suggested primer 2:TTGGGCCTGGCACATAGAAG