Insertion junction: CLIP2.005200_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005200
Chromosome:chromosome 3
Location:5087632
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180300 SIR3 (1 of 1) 1.8.1.2 - Assimilatory sulfite reductase (NADPH) / Sulfite reductase (NADPH); Sulfite reductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCGTCGGCAGGCAGGCGGAAGTCAGGGTTCTTGTGGACGTACACCGG
Internal bar code:TGTTTTGAAGAAAAGGTTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:934
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGATCACGCAGCTAACG
Suggested primer 2:CAACTCACAACGCACACCTG