Insertion junction: CLIP2.005200_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005200
Chromosome:chromosome 10
Location:5776067
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g460050 FLU1,FLU,FLP (1 of 1) PTHR10098//PTHR10098:SF123 - RAPSYN-RELATED // SUBFAMILY NOT NAMED; FLU protein, chloroplast precursor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAAGAACGGCGCCGCGGCCATGGTGCGCTTCGAGAAGGCGCTCATGC
Internal bar code:ATTCCTGAACAAACTTGAGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:428
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGTACTCGCCGATCTCC
Suggested primer 2:TTCAGCATGGAGGAGGAGGA