Insertion junction: CLIP2.005205_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005205
Chromosome:chromosome 17
Location:3686657
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCAGCCGATTCAGACTCGGAGTGGGTGGTGGTGGGTGGTGGCGATGG
Internal bar code:CTTTTTATTTCGCGGTTAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4348
LEAP-Seq percent confirming:86.2745
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TGACGGCTGAAACTGGGATC
Suggested primer 2:CGGTGAGCAACTGGGAAGAT