Insertion junction: CLIP2.005205_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005205
Chromosome:chromosome 17
Location:3686673
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725750 (1 of 3) K11089 - 60 kDa SS-A/Ro ribonucleoprotein (TROVE2, SSA2) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAATCGGCTGAGGCTGCAGCTGCCTCAGTGTCCGGGGCGGCCGCAGCC
Internal bar code:CTTTTTATTTCGCGGTTAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1917
LEAP-Seq percent confirming:70.5882
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGAGCAACTGGGAAGAT
Suggested primer 2:TGACGGCTGAAACTGGGATC