Insertion junction: CLIP2.005210_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005210
Chromosome:chromosome 17
Location:3778534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g726750 SHK1,SHKA1,DHAPS1 (1 of 1) 2.5.1.54 - 3-deoxy-7-phosphoheptulonate synthase / Phospho-2-oxo-3-deoxyheptonate aldolase; DHAP synthetase 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAAAAGGCGCCTGCAATCGTTCATGCATTCACGAAAATTTAACGCAGAG
Internal bar code:ACAATAATCGCCATTGTCGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCAGTGAAGAGCCATGCA
Suggested primer 2:GAACAGCACGAAGGCATCAC