Insertion junction: CLIP2.005218_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005218
Chromosome:chromosome 9
Location:4545686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401182 CGL153 predicted protein; (1 of 1) K14575 - AAA family ATPase (AFG2, DRG1, SPATA5) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGACCCCTTCCTCTCCCTTTTTCTCCCTCCGTGCCGTCGCTCTTCAC
Internal bar code:CGCCGAGGCGGTCAGCGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:789
LEAP-Seq percent confirming:95.6522
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCGCTCATTCGTTGGTC
Suggested primer 2:CATCGCCGTCAGATTTGCTG