Insertion junction: CLIP2.005224_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005224
Chromosome:chromosome 1
Location:3320527
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021450 TPR4 Tetratricopeptide-repeat protein 4; (1 of 1) PTHR23083//PTHR23083:SF443 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTAGTTAAGGAAGTGGTAGACGGTAGACCATCTTGCGGAACATGAAGCG
Internal bar code:GATCAGAGGGCATATTTTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1668
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGATGCTACCGTGCTTGC
Suggested primer 2:CAGCCGACTATTCAGCGGAT