Insertion junction: CLIP2.005227_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005227
Chromosome:chromosome 4
Location:1685373
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g212401 UBC15 (1 of 2) K10586 - baculoviral IAP repeat-containing protein 6 (apollon) (BIRC6, BRUCE); E2 Ubiquitin conjugating enzyme CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTGCGCGGCGTAGTGTCGGCGCAGCACGTCGGCAAAGGTGGCGCCACC
Internal bar code:AACAAGATTGATTTTCCGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:651
LEAP-Seq percent confirming:65.625
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CATGATCCTAGTGGCCGACC
Suggested primer 2:ACATAGGTGGACAGCTTGGC