Insertion junction: CLIP2.005233_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005233
Chromosome:chromosome 3
Location:4155751
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g173000 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGGCACTGTGTGTGTCAAGGGTCGTTCACAGGCTGGCGCGGGCTGGG
Internal bar code:GAGTTCCCCCGGACCCGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3848
LEAP-Seq percent confirming:76.7123
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACCTTCGGAGTCCATCG
Suggested primer 2:GTGGCTGTCTCCGTTTGGTA