Insertion junction: CLIP2.005235_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005235
Chromosome:chromosome 10
Location:5576771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458350 SRR16 (1 of 1) PTHR22803//PTHR22803:SF55 - MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED // C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 162; Scavenger receptor cysteine rich (SRCR) protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACCAGCCTGACAACAGCCGTGAGTCCCGAGGTGCACCGCAGCAGCCGG
Internal bar code:TTAGCCTCTTGCCAGCTGTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1484
LEAP-Seq percent confirming:67.7419
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACAACCCATTCCCGGAA
Suggested primer 2:TTGCAGGCACAAATCACGTG