Insertion junction: CLIP2.005239_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005239
Chromosome:chromosome 16
Location:7164578
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g676533 (1 of 1) IPR000742//IPR001599 - EGF-like domain // Alpha-2-macroglobulin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGGTGATGTACAAGGACTCGCGTTTGCAGCTGCTATTCTCCTTGCCGC
Internal bar code:GTCTTTGGTATAATTCCGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:977
LEAP-Seq percent confirming:47.619
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGACACCTACCTGAACGC
Suggested primer 2:AGACAGAGGACAGACGACGA