Insertion junction: CLIP2.005242_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005242
Chromosome:chromosome 5
Location:72184
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g241900 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGGCGAGGTGCTGGTGCTGGGGGACGACGACCCCTTCAGCGGCGGCA
Internal bar code:CCGGCGGAAGGCCCAGGCAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1822
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGAGCCCAGACTCGTATC
Suggested primer 2:TCGAAGCCGGTAAGAGGGTA