Insertion junction: CLIP2.005243_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005243
Chromosome:chromosome 10
Location:6620747
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g465950 CGL148 Conserved in the Green Lineage; (1 of 1) K12846 - U4/U6.U5 tri-snRNP-associated protein 3 (SNRNP27) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGAACTGATTTTTGTTTCCCACCTTACCCATAACCATGCCAGTCCAGG
Internal bar code:GCGGGTACTACGGGGTACTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:536
LEAP-Seq percent confirming:2.08333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTGAGGCAATGGTGACC
Suggested primer 2:GTAGAGCACGTCGTAGAGCC