Insertion junction: CLIP2.005248_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005248
Chromosome:chromosome 7
Location:1188968
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g321250 3'UTR
Cre07.g321300 (1 of 3) PF03703 - Bacterial PH domain (bPH_2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCCTCTTGTAACCAATTTTGAGAGGCAGAGCCATCTTTCTTCACAAA
Internal bar code:TTGGTCTGTTCGGGAGTTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3222
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:56
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAGCACGTAGAATGTCG
Suggested primer 2:TCTGCCACATGCTGTAGGTG