Insertion junction: CLIP2.005248_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005248
Chromosome:chromosome 10
Location:4481427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATAAGGTTCGAGGCCCAGGAAAGCGCGGAGTCCAAGCGAGTTGTATGGA
Internal bar code:TAGTGTTTCTGTGTCTCAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2326
LEAP-Seq percent confirming:78.2609
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTGGACTTCTCTGTGCCG
Suggested primer 2:TGGACATTCGCTGAGCAACT