Insertion junction: CLIP2.005254_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005254
Chromosome:chromosome 9
Location:1361088
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400312 (1 of 5) IPR001680//IPR011047//IPR017986 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATGTTCCCCTCACTCATGCGGCCGAGTTAGCTGCTCGGACAAGTTGCA
Internal bar code:AATTTACGTTATGGCCATGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3074
LEAP-Seq percent confirming:73.6842
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCAAACCGACATGCGTA
Suggested primer 2:CCAAAAGAGAACGCGCCAAA