Insertion junction: CLIP2.005263_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005263
Chromosome:chromosome 6
Location:6636428
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g294750 CHLG1,CHLG Chlorophyll synthetase; (1 of 1) 2.5.1.62 - Chlorophyll synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTATTGTGGAACGGGCGGGAACTCCGTCATGGCGCTCCGCATCGAGCC
Internal bar code:AAATTCCCACAGCGTGATTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4095
LEAP-Seq percent confirming:80.8333
LEAP-Seq n confirming:97
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCTCCAATTAAGCCCCC
Suggested primer 2:GCCTGAAGTGAGAGCGAGTT