Insertion junction: CLIP2.005264_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005264
Chromosome:chromosome 3
Location:7265592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g207400 (1 of 1) PTHR36846:SF1 - PROTEIN VIAA 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAATGCGTGTTAGTGAGTGCCTGGAGACCAGAGCAGTTTCGGGGCTGG
Internal bar code:AACTGTTAGCGTGATGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2068
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TTCACAGAGCTGCTCTTGGG
Suggested primer 2:AGTAGTTGGTGTTGCGGAGG